Logo


Home
Biophysical Motivation
SpringSalad
Installation
Quick Start Jupyter Notebook
Tutorial: SpringSaLaD simulation
Tutorial: SpringSaLaD results analysis
Quick Start command line
Publications
About

Installation

General Prerequisites

The best way to install Python is to download Anaconda distribution available for all operation systems. It has Jupyter notebook pre-installed that has a convenient way to run molclustpy. Anaconda install also should install pip. To check your installation, type in the terminal (command prompt on Windows):

python -i
pip -V
jupyter --version

In case Jupyter is missing and you prefer to use it (recommended for beginners), download it from https://jupyter.org/install.

Required Packages

Apart from the standard Python libraries, required third-party packages:

Install SpringSaLaDpy

pip install SpringSaLaDpy

Installation of SpringSaLaDpy will check for the third-party libraries and install them in case your machine does not have them.

Copy demo files and Jypyter notebooks

To get the sample files and demo Jupyter notebooks, please download or clone the https://github.com/SpringSaLaDpy/SpringSaLaDpy_demo.git

git clone https://github.com/SpringSaLaDpy/SpringSaLaDpy_demo.git

Downloading the source code

The source code may be cloned from the https://github.com/SpringSaLaDpy/SpringSaLaDpy_package

After download/install, follow the Start Guide